PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ahy005428
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family TCP
Protein Properties Length: 190aa    MW: 21041 Da    PI: 10.0391
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PUT-171a-Arachis_hypogaea-5618PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP92.49.6e-2947120374
        TCP   3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec..e 74 
                g+kdrhsk++T +g+RdRR+Rls+++a++++dLqd+LG+ ++sk i+WLlq+ k  i++ + ++ ++  +    
  Ahy005428  47 GGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDRLGLGQPSKVIDWLLQATKLDIDKPPPLQIPPGFAQfhH 120
                78*************************************************************77766333322 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5136927.74548106IPR017887Transcription factor TCP subgroup
PfamPF036349.5E-2648110IPR005333Transcription factor, TCP
Sequence ? help Back to Top
Protein Sequence    Length: 190 aa     Download sequence    Send to blast
MSSSKSSYQA KQEDDGGGGG GGGGTSSSRQ WTAFRNPRIV RVSRSLGGKD RHSKVCTIRG  60
LRDRRIRLSV PTAIQLYDLQ DRLGLGQPSK VIDWLLQATK LDIDKPPPLQ IPPGFAQFHH  120
QQTLIPLSHH HQFSLGGFYD ANSSRFWDMD SSSISLKGKE SDTITHPAGV ISEKGKWIXT  180
NQHVDENQDX
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015943543.11e-136PREDICTED: transcription factor TCP5-like
RefseqXP_015943551.11e-136PREDICTED: transcription factor TCP5-like
RefseqXP_015943558.11e-136PREDICTED: transcription factor TCP5-like
RefseqXP_015949865.11e-136PREDICTED: transcription factor TCP5-like
SwissprotQ9FME38e-49TCP5_ARATH; Transcription factor TCP5
TrEMBLA0A151S0B62e-72A0A151S0B6_CAJCA; Transcription factor TCP5
STRINGGLYMA06G22240.11e-68(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60970.13e-50TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 5